Insertion junction: CLIP2.004639_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004639
Chromosome:chromosome 1
Location:1742410
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009650 BUG25 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor; basal body protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGCGACAGCATTACAGGCAAGGGTGCGACTTGCACTTGGCGGGTACA
Internal bar code:TGCACTAGGCCTCATGATGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2766
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTGCTGAGATTGCGAGC
Suggested primer 2:ACTCGGACAGCGAGAAGTTG