Insertion junction: CLIP2.004645_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004645
Chromosome:chromosome 3
Location:5991366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189500 (1 of 3) K03574 - 8-oxo-dGTP diphosphatase [EC:3.6.1.55] (mutT, NUDT15, MTH2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCACCGACGTCTCCTCCTGCAGCTCACGAGCGGCCGCCACGTCCAGGC
Internal bar code:CGAGGCTTTACGACTGTATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2182
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAGCTCGGCAAAAAGAA
Suggested primer 2:GCGCTAGGCATGCTTAGGTA