Insertion junction: CLIP2.004648_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004648
Chromosome:chromosome 6
Location:3402518
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278094 ELG14 Exostosin-like glycosyltransferase 14; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTACAGCGGCATGATTGTGCGTCCCTGGTCTGTGTCCCTGGTGTGCAT
Internal bar code:ATGCCTGTTAGCGTAGGCCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1212
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGGCGTGTGTAGTGTCC
Suggested primer 2:CAGCGGACACAAACACACAG