Insertion junction: CLIP2.004656_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004656
Chromosome:chromosome 7
Location:5406568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350500 TSV,TSV1 Valyl-tRNA synthetase; (1 of 1) PTHR11946//PTHR11946:SF76 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // ATP BINDING/VALINE-TRNA LIGASE/AMINOACYL-TRNA LIGASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTTAGGGGATGACGAAACTGCAGCACGGCACCGATCCACTGCACTGC
Internal bar code:TATCTGTACCCAGCTCAGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3749
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGTAGAATGGAAGCGCG
Suggested primer 2:GCATCCATAAGCTCCCCTCC