Insertion junction: CLIP2.004664_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004664
Chromosome:chromosome 1
Location:2514917
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g014800 MSH7,CPL21 putative MutS type 2 DNA repair protein; (1 of 1) K07456 - DNA mismatch repair protein MutS2 (mutS2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCTGTCCGTGTCAACACACTCCAAATGGAAGCCGCTCCAGCCCTTGG
Internal bar code:ACTATAGCTCTATATCGACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2878
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACCTTCTGTGCACGTAC
Suggested primer 2:CGAGATAGGCACAGCTCCAG