Insertion junction: CLIP2.004665_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004665
Chromosome:chromosome 5
Location:3533583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g233650 FXL9 (1 of 2) IPR000014//IPR011990 - PAS domain // Tetratricopeptide-like helical domain; FixL-like PAS domain protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACAGGTGAGCCCACAACAACAGCCTCACAGTCCTAATGCAATTGTGCG
Internal bar code:ATCCTCCTTTTAAACATCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2301
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCTAGAGCTCAGCCCAG
Suggested primer 2:GCGCATCACTAGGACCTACC