Insertion junction: CLIP2.004667_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004667
Chromosome:chromosome 1
Location:398014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g002350 NAE1 RUB1/NEDD8 E1 activating enzyme; (1 of 1) K04532 - amyloid beta precursor protein binding protein 1 (APPBP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTGAGACCCACCCGTTAGACCACTCCGGCACGAGATCAACCAGAAAA
Internal bar code:AGGTGTCTATAGGGTCAGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:395
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGGAGGTGGTGTGGGTG
Suggested primer 2:CATATGCCACGCAGGTTTCG