Insertion junction: CLIP2.004672_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004672
Chromosome:chromosome 12
Location:7742214
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554600 CGL146 Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCACCTGAATTTGAAGGACTTCAGTTCCACCTGCTGGAGGTCAGCTTC
Internal bar code:GAGAGATAGGCGCCATGATCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:622
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CATACTCACATACGGCGGCT
Suggested primer 2:CCACGAAAACCCTGTGCTTG