Insertion junction: CLIP2.004680_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004680
Chromosome:chromosome 7
Location:31769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g312050 (1 of 1) 1.5.3.1//1.5.3.7 - Sarcosine oxidase // L-pipecolate oxidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTGCTACTGCCAGGGTTGGTGATCAGCAGGGAGGGACAAGCTACGTC
Internal bar code:GGGTTCCAGAGTATCTTCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4845
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCAACCAATTGCGGAAC
Suggested primer 2:GGGAACATCCATCGGGTGTT