Insertion junction: CLIP2.004682_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004682
Chromosome:chromosome 3
Location:4194976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173450 PAO4 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGAAGGAGGCATGGCGGCTGGACGCCGTGCATTCACTTCTATCCCCC
Internal bar code:TTATCAAGGGAGCTCCTGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:101
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGGAAGAGGGAAGGGAG
Suggested primer 2:CCAGCACCCACATCCTCAAT