Insertion junction: CLIP2.004685_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004685
Chromosome:chromosome 16
Location:3102215
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664801 RBL4 rhomboid-like protease; (1 of 4) PTHR22936//PTHR22936:SF32 - RHOMBOID-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCGGCCGATGCATGCGTCCTGGGCTCCGCGAGAAGCACCCGCTGCTGT
Internal bar code:CGGTTCATGTGTTAAGAAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:687
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCAAAGCGGAGACCAGGA
Suggested primer 2:TAGTGGTTGAGGTGCAGCAG