Insertion junction: CLIP2.004689_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004689
Chromosome:chromosome 17
Location:3448521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723550 IPP4,CPLD4 (1 of 1) 3.1.3.15 - Histidinol-phosphatase; Putative Inositol-phosphate phosphatase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTACATGTCCCAGCAGCCGCAATCACGTCCGCTCCCACCCCGTCCGC
Internal bar code:GCCCCCGCCGCCGCAAGGCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:515
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCAAACTACACCAGACGA
Suggested primer 2:GTATGGAGCCGGTCTGTACG