Insertion junction: CLIP2.004698_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004698
Chromosome:chromosome 17
Location:3303740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722300 (1 of 26) IPR017850 - Alkaline-phosphatase-like, core domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGATAACATCGTAGTCCGCGCTGTCGAGAATCTCCACATCAGCACC
Internal bar code:GGGGGTCGAAACTTGTGCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2249
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTATCCAGGGCGTCGGTTAG
Suggested primer 2:GCAACAGTGAGGAGTTCGGA