| Insertion cassette: | CIB2 |
| Side of cassette: | 3' |
| Strand: | - |
| Strain: | CLIP2.004703 |
| Chromosome: | chromosome 5 |
| Location: | 151476 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre05.g242400 | PGR5 | Proton-gradient related; (1 of 1) PTHR35709:SF1 - PROTEIN PROTON GRADIENT REGULATION 5, CHLOROPLASTIC | 5'UTR |
| lncRNA_TCONS_00048232 | 5'UTR |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | GGGCGTGCGGTGGGTGGCGCCTTCGCGGCAACCTGGGCCACAGGCTGCGA |
| Internal bar code: | GTGTACACTGATGGGGATTCGA |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 3084 |
| LEAP-Seq percent confirming: | 88.8889 |
| LEAP-Seq n confirming: | 32 |
| LEAP-Seq n nonconfirming: | 4 |
| LEAP-Seq n unique pos: | 36 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | TGTTGCCCATCATCGTCACA |
| Suggested primer 2: | AAAGCATGGACGCATACCCA |