Insertion junction: CLIP2.004714_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004714
Chromosome:chromosome 14
Location:899683
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613250 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGGCTGCCTTGCACAGGCGCGTCAACGCATGGCTCGATCAAACGTCC
Internal bar code:AAGTTCATTTCTAAGATACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:721
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGACGCAATGATCCTGT
Suggested primer 2:ATGGCATAGAGAGGTGCAGC