Insertion junction: CLIP2.004716_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004716
Chromosome:chromosome 16
Location:2621162
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661250 THB9 (1 of 6) PTHR10681//PTHR10681:SF118 - THIOREDOXIN PEROXIDASE // SUBFAMILY NOT NAMED; Truncated hemoglobin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGCTGGATAATCGGTTGAGACCTGCCGGTGTCTGGTCTGCGGTCTTT
Internal bar code:AATAGCACAAATTTCGAATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1186
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCAGGTTGGCATAGTCC
Suggested primer 2:GGACATATGTCGTCGGGCAT