Insertion junction: CLIP2.004718_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004718
Chromosome:chromosome 2
Location:1305183
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082500 PSAN1 (1 of 1) K02701 - photosystem I subunit PsaN (psaN); Photosystem I reaction center subunit N 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACAAACTCGGCACGGCGCGCCGCATTCAGCAATGCAACCTGTTGT
Internal bar code:GGCGAGGAGTCATTCAGGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2185
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCTGTAACCTGAACGGC
Suggested primer 2:TCCACCTACAAGCTGCACTG