Insertion junction: CLIP2.004724_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004724
Chromosome:chromosome 9
Location:6086696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412803 CGL88 predicted protein; (1 of 1) PTHR10383//PTHR10383:SF24 - SERINE INCORPORATOR // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACACGAGCCAGTCCTGCAGAGAGGGACACGCCCGATGCGAAACGCA
Internal bar code:CTTACTGGTAAATTTCGAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1252
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACGCAATCAGATGTGAG
Suggested primer 2:CCATATCGACCTGCGTCACA