Insertion junction: CLIP2.004742_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004742
Chromosome:chromosome 6
Location:7865948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g303600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGAGAGGTCTTCAGTCTCAGTTGCACAGCAGGCCTTTCTGCTCGCACA
Internal bar code:TGGGTTTGCCAGGCGGTGTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1853
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGTCGCCTCGCTATGAG
Suggested primer 2:ATGGAGTGGCATATCGCGAG