Insertion junction: CLIP2.004743_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004743
Chromosome:chromosome 1
Location:5211304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036350 PMA1 (1 of 5) K01537 - Ca2+-transporting ATPase (E3.6.3.8); Related to plasma membrane P-type and chloroplast type calcium ATPases CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGACTACAGCAAGGACCGGCAGTTCGCGGCGCTGAACCGGCAGCGCGAC
Internal bar code:GATACAGTAGGACATGTTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:694
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACGTGCGTGTGTGTGTG
Suggested primer 2:GGAGGGAACGAAGCGGATAG