Insertion junction: CLIP2.004748_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004748
Chromosome:chromosome 1
Location:2746434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016570 (1 of 1) IPR000104//IPR000719//IPR001245//IPR002290//IPR011009//IPR016024//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Armadillo-type fold // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGAGTGTGTACCCTCGTCCTGACCTCCTACTAGTCATGAATGCAACCC
Internal bar code:GTTCGAAACGTTCATATTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:91
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTTTATCACCCGCATG
Suggested primer 2:CCGCTCGTTTTCGTTGGTTT