Insertion junction: CLIP2.004758_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004758
Chromosome:chromosome 4
Location:2853759
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224300 CGL84 (1 of 22) PTHR10994 - RETICULON; Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGCTGATTCAGTCAGCGTTGCCGAGAATTGCGCGTGTCGAGATCCCAA
Internal bar code:CTTAGGTTGCGGAAGTGGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1560
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCAACATCTCCAAGGACT
Suggested primer 2:TTTCCGATGACAGGAGGCAC