Insertion junction: CLIP2.004763_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004763
Chromosome:chromosome 16
Location:6239662
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676450 CPLD39 Conserved in the Plant Lineage and Diatoms 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAGGGGTGCGGAGCGGCCAACCCCTTAACAATGAACTTGCTTTGCGT
Internal bar code:CGGAGACGTCCACGTCGGCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1894
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGCTCGAAACCTGCCAG
Suggested primer 2:GCTGGGCAAGTATGAATGCG