Insertion junction: CLIP2.004771_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004771
Chromosome:chromosome 2
Location:2979870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095350 DNK1,CGL116 Conserved in the Green Lineage; (1 of 1) PTHR10513 - DEOXYNUCLEOSIDE KINASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGTGCCTGTGCCTCCCCAAAACACACACGCGCCTCCCCCCCCGCGC
Internal bar code:GCTCAAGACAATCCCAGCTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:301
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCGTATCCACATGCTAC
Suggested primer 2:ACCTTCACCTGCCTGCATAC