Insertion junction: CLIP2.004771_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004771
Chromosome:chromosome 2
Location:2979873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095350 DNK1,CGL116 Conserved in the Green Lineage; (1 of 1) PTHR10513 - DEOXYNUCLEOSIDE KINASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCACACACATACCGTACACACGTGCACACGCACGCGCCCGCACCTGCA
Internal bar code:GCTCAAGACAATCCCAGCTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3649
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTCACCTGCCTGCATAC
Suggested primer 2:CCCCCGTATCCACATGCTAC