Insertion junction: CLIP2.004774_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004774
Chromosome:chromosome 3
Location:2473849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159150 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED 5'UTR
Cre03.g159200 UBC8 (1 of 2) K10589 - ubiquitin-protein ligase E3 C (UBE3C); Putative ubiquitin-protein ligase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAAACCAAGTCTGCTCGGCAGCGTGCGAAACTCAAGCGAAGTCCACCT
Internal bar code:GGTCTTTTGTAGATTCGAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1979
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACAAGGAGTCACGACCA
Suggested primer 2:AGAGGGGTCGTAAGGAGGTC