Insertion junction: CLIP2.004784_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004784
Chromosome:chromosome 7
Location:6127819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355750 (1 of 1) IPR001680//IPR001810//IPR017986//IPR020472 - WD40 repeat // F-box domain // WD40-repeat-containing domain // G-protein beta WD-40 repeat 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACTTTACACTTTGTGTATCTGCTTCTCCCCCGCGCAGGTCCGCGCGTC
Internal bar code:TTCTAGTGTGTTAATATTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1143
LEAP-Seq percent confirming:89.3617
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGGAAGAGTATGAAGCA
Suggested primer 2:GGACGCACAGAAGAAGTGGA