Insertion junction: CLIP2.004784_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004784
Chromosome:chromosome 7
Location:6127824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355750 (1 of 1) IPR001680//IPR001810//IPR017986//IPR020472 - WD40 repeat // F-box domain // WD40-repeat-containing domain // G-protein beta WD-40 repeat 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGCAGTGCAGTCGAGCTGACGCTGCACGACTAGTCAAGCGCAAACTCG
Internal bar code:TTCTAGTGTGTTAATATTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2205
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGACGCACAGAAGAAGTGGA
Suggested primer 2:GCCCGGAAGAGTATGAAGCA