Insertion junction: CLIP2.004785_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004785
Chromosome:chromosome 6
Location:1457177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g260250 CEMA,CEM1,YCF10 putative proton extrusion protein cemA, chloroplastic; (1 of 1) PTHR33650:SF1 - CEMA-LIKE PROTON EXTRUSION PROTEIN-LIKE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACAGGGTGATTCTCGCGCAAGGAGGCAGCAATGCAGGTCCAGGGCCTG
Internal bar code:CAAGTCATGGGTAATGTTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2585
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTCCCGTGATCATCTGC
Suggested primer 2:ATCGAATGTGCTGGCAAGGA