Insertion junction: CLIP2.004788_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004788
Chromosome:chromosome 12
Location:4171633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517681 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACTGTGCACCATAGCGGTCGCGTTGTCCCGCCCGCCCTCTGCCTGCC
Internal bar code:AAGTACATTACACCGGTACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1500
LEAP-Seq percent confirming:88.3721
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGAATTGGCAGCCTGGTG
Suggested primer 2:CATGTCACTCCCACTCACCC