Insertion junction: CLIP2.004793_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004793
Chromosome:chromosome 6
Location:464618
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g252200 TOC34 Translocon at the outer envelope membrane of chloroplasts, receptor subunit; (1 of 1) PTHR10903//PTHR10903:SF43 - GTPASE, IMAP FAMILY MEMBER-RELATED // GTP-BINDING PROTEIN A 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACAACTGTCCCCTTTGCCGGCCCCATCGTACACAAATGAGGCCGGCCA
Internal bar code:TCTGTGACCAGTCAACAGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1903
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGAAGGAGGAAGTGGTGA
Suggested primer 2:GATGCCAAGGCCTTTCTCCT