Insertion junction: CLIP2.004800_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004800
Chromosome:chromosome 6
Location:2648738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270350 AMYB2,AMB2 Beta-amylase 2; (1 of 3) 3.2.1.2 - Beta-amylase / Saccharogen amylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCACCTGGCTCTCGCATTCACGCACACACGCAGGTCGTCATACAAGCA
Internal bar code:CACTGGTACCCCGACCGTCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:733
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGATGCAGTGTGTGTTG
Suggested primer 2:GGGCTCGTAGTTATGTCCGG