Insertion junction: CLIP2.004808_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004808
Chromosome:chromosome 17
Location:3337064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722700 (1 of 2) PF04893 - Yip1 domain (Yip1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGGCCTGATGCAAGTCCGATCCGCCCTTCTCGCTCTCGGCGCTTGAA
Internal bar code:ATGGACTTATGTTCGGGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1000
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGATCCGGTAGTCAACG
Suggested primer 2:TACTGTTGAGCGGTGGTGTC