Insertion junction: CLIP2.004815_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004815
Chromosome:chromosome 10
Location:285027
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419700 CGL6 (1 of 4) PF05653 - Magnesium transporter NIPA (Mg_trans_NIPA); Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCTCGAGACCGCATAACACTGCGTCCGCCGCGGCCGCCGCAGCAGC
Internal bar code:CCCTTGAGGTGATCCCCCGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:778
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGCCCCAACCTAATCCT
Suggested primer 2:CCAGTTGGACACGAGAAGCT