Insertion junction: CLIP2.004821_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004821
Chromosome:chromosome 1
Location:6896834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049350 (1 of 1) PTHR31412//PTHR31412:SF5 - FAMILY NOT NAMED // ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCACGACCCTACAGCGCAACCAGATTGGAATAACTGGTGACGGTGACA
Internal bar code:TAGAAATTAAACTCAAATTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1853
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTTATGCTGTGCTACGG
Suggested primer 2:CGAAGAAGAATGCGAGCACG