Insertion junction: CLIP2.004842_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004842
Chromosome:chromosome 6
Location:74616
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g249350 DMC3,DMT1A (1 of 4) K00558 - DNA (cytosine-5)-methyltransferase 1 (DNMT1, dcm); Putative DNA methylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCTGTCCCACTCTGGCTACTTCCGAACCGCCATCACCACCCCCCGCGT
Internal bar code:TTCTCATACCTTATAAACGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:197
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTTTGCTCTTCCTGTGC
Suggested primer 2:GAGGTGCGGCTGTAGCTATT