Insertion junction: CLIP2.004849_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004849
Chromosome:chromosome 10
Location:2452780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435500 EFT2 (1 of 1) IPR001816//IPR009060//IPR014039 - Translation elongation factor EFTs/EF1B // UBA-like // Translation elongation factor EFTs/EF1B, dimerisation; elongation factor Ts-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGTCGGCCGCCGGGTTCTCCGCCGGGAAGCGCCAAGGGTTTTCGCAG
Internal bar code:TGAGTAAGTTGTGCTCTTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5851
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACTGATCAGAGCCGCAT
Suggested primer 2:CGTGGGCTCAGATTTCACCT