Insertion junction: CLIP2.004852_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004852
Chromosome:chromosome 1
Location:4694700
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032500 DNJ8,TPR2 Tetratricopeptide-repeat protein 2; (1 of 1) K09523 - DnaJ homolog subfamily C member 3 (DNAJC3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCAGCGCCACCCGGCCCCAAGCAAGCTCCTCTGCCTGCCATGCTTGG
Internal bar code:GAGGGGCCGGACCTGCCATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2701
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGGAACTCCCTGTCTTC
Suggested primer 2:TGCAAGGGTGTCACAACAGT