Insertion junction: CLIP2.004852_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004852
Chromosome:chromosome 1
Location:4694704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032500 DNJ8,TPR2 Tetratricopeptide-repeat protein 2; (1 of 1) K09523 - DnaJ homolog subfamily C member 3 (DNAJC3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGCCGCAGCAGCCGCAGCAGCCGCAGCCTCTTTGCCGTGTGCGGCT
Internal bar code:GGTGTAGGATTCGGGGCACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1045
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAAGGGTGTCACAACAGT
Suggested primer 2:GCCTGGAACTCCCTGTCTTC