Insertion junction: CLIP2.004853_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004853
Chromosome:chromosome 6
Location:3640318
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278141 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCATCGCCCACTCCGCCGTCTCAATGCTGCCGCCCACCCCGACCGAG
Internal bar code:GCAGCCACCTATGGGTAAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1648
LEAP-Seq percent confirming:27.5862
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:63
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTGTGTGCTTTTACGTG
Suggested primer 2:GATGTACACATTGCCCGTGC