Insertion junction: CLIP2.004876_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004876
Chromosome:chromosome 12
Location:2206900
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509001 RPK2 RNA-polymerase-subunit kinase; (1 of 2) PTHR24055//PTHR24055:SF10 - MITOGEN-ACTIVATED PROTEIN KINASE // MITOGEN-ACTIVATED PROTEIN KINASE 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACATGTGGTGAGACACGCAGCTTCCGCCCACGCCCTTGTCGCACGCA
Internal bar code:GGGCCCGATTGATATTGGCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1231
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTAGGTCCCGTCATAG
Suggested primer 2:GGCTCGCAGGAAAAATGCAA