Insertion junction: CLIP2.004877_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004877
Chromosome:chromosome 6
Location:4014560
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278212 CGL46 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGGCAGAAACACGTCCTTCATGACGCGGAACAGCCGGAAGCTCGCCTG
Internal bar code:GGCAAAGGTGCAGTGTAGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3983
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTTGTATCATGCGCACG
Suggested primer 2:CGGTACCTGCAGGAACATGT