Insertion junction: CLIP2.004885_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004885
Chromosome:chromosome 12
Location:6614840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538850 (1 of 1) PTHR13720//PTHR13720:SF9 - WD-40 REPEAT PROTEIN // ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE ELP-1; Similar to Echinoderm Microtubule Associated Protein Like 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGGGGCGCGGGAGTGCTGCGAATCTGTCTTGTGTACCGTAGGCAAGC
Internal bar code:GACTGCACGTATACACAATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4870
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GTACACGAACTGGAGCACCA
Suggested primer 2:AATGAGCCGAACCCGTCAAT