Insertion junction: CLIP2.004886_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004886
Chromosome:chromosome 3
Location:177257
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144064 (1 of 24) IPR001478 - PDZ domain 3'UTR
Cre03.g144084 RBL7 Rhomboid-like protease; (1 of 11) 3.4.21.105 - Rhomboid protease outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGGACCGGTCTCGCAGGGTGGCGTTGAAACTCAGTTGCCGAGACTGCT
Internal bar code:ATCATACGTAAGAATGACCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1987
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATGCAACATCTGTGCAC
Suggested primer 2:TTGGTGTGCGCTTTGTCATG