Insertion junction: CLIP2.004890_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004890
Chromosome:chromosome 9
Location:5349205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407801 AKC1 (1 of 1) PTHR10566//PTHR10566:SF41 - CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED // SUBFAMILY NOT NAMED; ABC1/COQ8 ser/thr kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAAAGAAAACAACAAAACGAAGCCCGCCCAGACGGCGCGACGGAGTT
Internal bar code:TAGAATTCAATTTAGACAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1440
LEAP-Seq percent confirming:26.7857
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACACAAACCGACGTC
Suggested primer 2:TGGCGTACGCAAAGTCTCTT