Insertion junction: CLIP2.004891_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004891
Chromosome:chromosome 8
Location:44340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358250 PPR14,MCA1 (1 of 2) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3); petA mRNA stabilization factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACTGCAAGGCCGCCTATTTCCGCTGCGGCCGGTGCCAGCGGCACGGCT
Internal bar code:GCCGGGGAAACCCAGTCTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1104
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAAGGTAACCCAACCGCT
Suggested primer 2:TCGCAACCCTACACAACTCC