Insertion junction: CLIP2.004903_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004903
Chromosome:chromosome 5
Location:166659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242600 CGL106 (1 of 2) IPR000679//IPR013088 - Zinc finger, GATA-type // Zinc finger, NHR/GATA-type; zinc finger GATA transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAACCCAAATGTCATCCGACCATTGACATCCACCCGCCCAGTGCTAGC
Internal bar code:AAGCTTTGCCTCCCTTCTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:4518
LEAP-Seq percent confirming:92.4528
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCCCACTTTGGAAACCA
Suggested primer 2:AAACAATTGGCGCACAGACC