Insertion junction: CLIP2.004907_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004907
Chromosome:chromosome 2
Location:5224211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112300 MOT15,CAL3 Calpain family cysteine protease; (1 of 2) K08582 - calpain-15 [EC:3.4.22.-] (CAPN15) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCAGGGATGTTAGGAACCGGTCTGCACGACTACCGCACTGTATACTGA
Internal bar code:GTCTTATTAGCAAGTCGCGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:471
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AACACACCAAACAGCCCAGA
Suggested primer 2:GTAGGCGTGCATGCTTAACG