Insertion junction: CLIP2.004912_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004912
Chromosome:chromosome 10
Location:1732171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g430150 REP27,LPA1 (1 of 1) PF11998//PF13414 - Protein of unknown function (DUF3493) (DUF3493) // TPR repeat (TPR_11); Low Photosystem II Accumulation 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACGAGTGCCCCAGATCTCTCAGTCATTCATGTTTGTCAGGCAAGAAAA
Internal bar code:CGAAATACATACTACGATATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2715
LEAP-Seq percent confirming:97.8261
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGAGATGGCTGTTGCAG
Suggested primer 2:GCACGGGAATGTTGCACTTT