Insertion junction: CLIP2.004916_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004916
Chromosome:chromosome 1
Location:529611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003200 (1 of 1) 1.1.1.179 - D-xylose 1-dehydrogenase (NADP(+)) / D-xylose-NADP dehydrogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAATGTATTTATATGCCGCATGCCGTATGCGAGTAATGGTGTCTCTC
Internal bar code:TTGCTTTAGAATTTTACACGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1693
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCCTTCCGAAACTACACA
Suggested primer 2:TGACCTCCCAACCAAAACCC